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plot.",[169,170,172],"h2",{"id":171},"_1-install","1. Install",[174,175,180],"pre",{"className":176,"code":177,"language":178,"meta":179,"style":179},"language-bash shiki shiki-themes material-theme-lighter material-theme material-theme-palenight","pip install browzarr\n","bash","",[181,182,183],"code",{"__ignoreMap":179},[184,185,188,192,196],"span",{"class":186,"line":187},"line",1,[184,189,191],{"class":190},"sBMFI","pip",[184,193,195],{"class":194},"sfazB"," install",[184,197,198],{"class":194}," browzarr\n",[169,200,202],{"id":201},"_2-create-a-browzarr-session","2. Create a Browzarr session",[165,204,205,206,209,210,214],{},"A ",[181,207,208],{},"Browzarr"," object describes ",[211,212,213],"em",{},"what"," to visualize. You give it a dataset and a variable,\nthen optionally adjust what visual characteristics to highlgiht.",[174,216,220],{"className":217,"code":218,"language":219,"meta":179,"style":179},"language-python shiki shiki-themes material-theme-lighter material-theme material-theme-palenight","from browzarr import Browzarr\n\nbz = Browzarr(dataset=\"path:\u002F\u002Fsome-zarr-store\", variable=\"temperature\")\n","python",[181,221,222,238,245],{"__ignoreMap":179},[184,223,224,228,232,235],{"class":186,"line":187},[184,225,227],{"class":226},"s7zQu","from",[184,229,231],{"class":230},"sTEyZ"," browzarr ",[184,233,234],{"class":226},"import",[184,236,237],{"class":230}," Browzarr\n",[184,239,241],{"class":186,"line":240},2,[184,242,244],{"emptyLinePlaceholder":243},true,"\n",[184,246,248,251,255,259,262,266,268,271,274,276,279,282,284,286,289,291],{"class":186,"line":247},3,[184,249,250],{"class":230},"bz ",[184,252,254],{"class":253},"sMK4o","=",[184,256,258],{"class":257},"s2Zo4"," Browzarr",[184,260,261],{"class":253},"(",[184,263,265],{"class":264},"sHdIc","dataset",[184,267,254],{"class":253},[184,269,270],{"class":253},"\"",[184,272,273],{"class":194},"path:\u002F\u002Fsome-zarr-store",[184,275,270],{"class":253},[184,277,278],{"class":253},",",[184,280,281],{"class":264}," variable",[184,283,254],{"class":253},[184,285,270],{"class":253},[184,287,288],{"class":194},"temperature",[184,290,270],{"class":253},[184,292,293],{"class":253},")\n",[295,296,298],"h3",{"id":297},"constructor-fields","Constructor fields",[300,301,302,321],"table",{},[303,304,305],"thead",{},[306,307,308,312,315,318],"tr",{},[309,310,311],"th",{},"Field",[309,313,314],{},"Type",[309,316,317],{},"Default",[309,319,320],{},"Description",[322,323,324,355,373,390,409,432,450,468],"tbody",{},[306,325,326,331,336,341],{},[327,328,329],"td",{},[181,330,265],{},[327,332,333],{},[181,334,335],{},"str",[327,337,338],{},[211,339,340],{},"(required)",[327,342,343,344,347,348,347,351,354],{},"Zarr store path or NetCDF ",[181,345,346],{},".nc"," \u002F ",[181,349,350],{},".nc4",[181,352,353],{},".netcdf"," file.",[306,356,357,362,366,370],{},[327,358,359],{},[181,360,361],{},"variable",[327,363,364],{},[181,365,335],{},[327,367,368],{},[211,369,340],{},[327,371,372],{},"The variable name to visualize.",[306,374,375,380,384,387],{},[327,376,377],{},[181,378,379],{},"variable2",[327,381,382],{},[181,383,335],{},[327,385,386],{},"None",[327,388,389],{},"The name of a second variable for bivariate plotting.",[306,391,392,397,401,406],{},[327,393,394],{},[181,395,396],{},"share_scale",[327,398,399],{},[181,400,335],{},[327,402,403],{},[181,404,405],{},"false",[327,407,408],{},"Whether both variables use the same scale\u002Funits.",[306,410,411,416,421,426],{},[327,412,413],{},[181,414,415],{},"x_slice",[327,417,418],{},[181,419,420],{},"tuple[int, int | None]",[327,422,423],{},[181,424,425],{},"(0, None)",[327,427,428,429,431],{},"X-axis slice (start, stop). ",[181,430,386],{}," means \"to the end\".",[306,433,434,439,443,447],{},[327,435,436],{},[181,437,438],{},"y_slice",[327,440,441],{},[181,442,420],{},[327,444,445],{},[181,446,425],{},[327,448,449],{},"Y-axis slice.",[306,451,452,457,461,465],{},[327,453,454],{},[181,455,456],{},"z_slice",[327,458,459],{},[181,460,420],{},[327,462,463],{},[181,464,425],{},[327,466,467],{},"Z-axis slice.",[306,469,470,475,480,485],{},[327,471,472],{},[181,473,474],{},"extra_params",[327,476,477],{},[181,478,479],{},"dict",[327,481,482],{},[181,483,484],{},"{}",[327,486,487,488,491],{},"Additional parameters merged into the plot state (advanced, see ",[489,490,116],"a",{"href":117},").",[174,493,495],{"className":217,"code":494,"language":219,"meta":179,"style":179},"# Load only a subset of a large dataset\nbz = Browzarr(\n    dataset=\"gs:\u002F\u002Fsome-zarr-store\",\n    variable=\"temperature\",\n    z_slice=(0, 50),\n    y_slice=(10, 200),\n    x_slice=(10, 200),\n)\n",[181,496,497,503,514,531,547,568,586,602],{"__ignoreMap":179},[184,498,499],{"class":186,"line":187},[184,500,502],{"class":501},"sHwdD","# Load only a subset of a large dataset\n",[184,504,505,507,509,511],{"class":186,"line":240},[184,506,250],{"class":230},[184,508,254],{"class":253},[184,510,258],{"class":257},[184,512,513],{"class":253},"(\n",[184,515,516,519,521,523,526,528],{"class":186,"line":247},[184,517,518],{"class":264},"    dataset",[184,520,254],{"class":253},[184,522,270],{"class":253},[184,524,525],{"class":194},"gs:\u002F\u002Fsome-zarr-store",[184,527,270],{"class":253},[184,529,530],{"class":253},",\n",[184,532,534,537,539,541,543,545],{"class":186,"line":533},4,[184,535,536],{"class":264},"    variable",[184,538,254],{"class":253},[184,540,270],{"class":253},[184,542,288],{"class":194},[184,544,270],{"class":253},[184,546,530],{"class":253},[184,548,550,553,556,560,562,565],{"class":186,"line":549},5,[184,551,552],{"class":264},"    z_slice",[184,554,555],{"class":253},"=(",[184,557,559],{"class":558},"sbssI","0",[184,561,278],{"class":253},[184,563,564],{"class":558}," 50",[184,566,567],{"class":253},"),\n",[184,569,571,574,576,579,581,584],{"class":186,"line":570},6,[184,572,573],{"class":264},"    y_slice",[184,575,555],{"class":253},[184,577,578],{"class":558},"10",[184,580,278],{"class":253},[184,582,583],{"class":558}," 200",[184,585,567],{"class":253},[184,587,589,592,594,596,598,600],{"class":186,"line":588},7,[184,590,591],{"class":264},"    x_slice",[184,593,555],{"class":253},[184,595,578],{"class":558},[184,597,278],{"class":253},[184,599,583],{"class":558},[184,601,567],{"class":253},[184,603,605],{"class":186,"line":604},8,[184,606,293],{"class":253},[169,608,610],{"id":609},"_3-choose-a-plot-type","3. Choose a plot type",[165,612,613,614,616],{},"Pick one plot method to configure the visualization. Each returns the same ",[181,615,208],{},"\nobject so you can keep chaining or store it.",[174,618,620],{"className":217,"code":619,"language":219,"meta":179,"style":179},"bz.volume()      # 3D volume render\n# bz.points()    # point cloud\n# bz.flat()      # flat (3D-displaceable) surface\n# bz.sphere()    # globe\u002Fsphere\n",[181,621,622,639,644,649],{"__ignoreMap":179},[184,623,624,627,630,633,636],{"class":186,"line":187},[184,625,626],{"class":230},"bz",[184,628,629],{"class":253},".",[184,631,632],{"class":257},"volume",[184,634,635],{"class":253},"()",[184,637,638],{"class":501},"      # 3D volume render\n",[184,640,641],{"class":186,"line":240},[184,642,643],{"class":501},"# bz.points()    # point cloud\n",[184,645,646],{"class":186,"line":247},[184,647,648],{"class":501},"# bz.flat()      # flat (3D-displaceable) surface\n",[184,650,651],{"class":186,"line":533},[184,652,653],{"class":501},"# bz.sphere()    # globe\u002Fsphere\n",[165,655,656],{},"You can pass options directly:",[174,658,660],{"className":217,"code":659,"language":219,"meta":179,"style":179},"bz.volume(colormap=\"inferno\", transparency=0.5)\n",[181,661,662],{"__ignoreMap":179},[184,663,664,666,668,670,672,675,677,679,682,684,686,689,691,694],{"class":186,"line":187},[184,665,626],{"class":230},[184,667,629],{"class":253},[184,669,632],{"class":257},[184,671,261],{"class":253},[184,673,674],{"class":264},"colormap",[184,676,254],{"class":253},[184,678,270],{"class":253},[184,680,681],{"class":194},"inferno",[184,683,270],{"class":253},[184,685,278],{"class":253},[184,687,688],{"class":264}," transparency",[184,690,254],{"class":253},[184,692,693],{"class":558},"0.5",[184,695,293],{"class":253},[165,697,698,699,701,702,706,707,706,711,706,715,629],{},"Options for each plot are found in the ",[489,700,116],{"href":117},":\n",[489,703,705],{"href":704},"\u002Fpybrowzarr\u002Fapi-reference#common-options","Common",", ",[489,708,710],{"href":709},"\u002Fpybrowzarr\u002Fapi-reference#volume","Volume",[489,712,714],{"href":713},"\u002Fpybrowzarr\u002Fapi-reference#points","Points",[489,716,718],{"href":717},"\u002Fpybrowzarr\u002Fapi-reference#flat-sphere","Flat & Sphere",[169,720,722],{"id":721},"_4-launch-the-plot","4. Launch the plot",[174,724,726],{"className":217,"code":725,"language":219,"meta":179,"style":179},"bz.plot()\n",[181,727,728],{"__ignoreMap":179},[184,729,730,732,734,737],{"class":186,"line":187},[184,731,626],{"class":230},[184,733,629],{"class":253},[184,735,736],{"class":257},"plot",[184,738,739],{"class":253},"()\n",[165,741,742,745,746,629],{},[181,743,744],{},"plot()"," starts (or reuses) a local server and opens the view. Where it appears depends\non your environment — see ",[489,747,106],{"href":107},[295,749,751],{"id":750},"getting-the-url-instead-of-opening-a-browser","Getting the URL instead of opening a browser",[174,753,755],{"className":217,"code":754,"language":219,"meta":179,"style":179},"url = bz.plot(give_url=True)\nprint(url)  # https:\u002F\u002Fbrowzarr.io\u002Flatest\u002F?data=...\n",[181,756,757,779],{"__ignoreMap":179},[184,758,759,762,764,767,769,771,773,776],{"class":186,"line":187},[184,760,761],{"class":230},"url ",[184,763,254],{"class":253},[184,765,766],{"class":230}," bz",[184,768,629],{"class":253},[184,770,736],{"class":257},[184,772,261],{"class":253},[184,774,775],{"class":264},"give_url",[184,777,778],{"class":253},"=True)\n",[184,780,781,784,786,789,792],{"class":186,"line":240},[184,782,783],{"class":257},"print",[184,785,261],{"class":253},[184,787,788],{"class":257},"url",[184,790,791],{"class":253},")",[184,793,794],{"class":501},"  # https:\u002F\u002Fbrowzarr.io\u002Flatest\u002F?data=...\n",[165,796,797],{},"Provides a url to the plot that you can open in a browser or share with others.",[169,799,801],{"id":800},"full-example","Full example",[174,803,805],{"className":217,"code":804,"language":219,"meta":179,"style":179},"from browzarr import Browzarr\n\nBrowzarr(\n    dataset=\"gs:\u002F\u002Fsome-zarr-store\",\n    variable=\"temperature\",\n    z_slice=(0, 40),\n).volume(\n    colormap=\"turbo\",\n    transparency=0.6,\n    value_range=(270, 310),\n).plot()\n",[181,806,807,817,821,827,841,855,870,878,894,907,925],{"__ignoreMap":179},[184,808,809,811,813,815],{"class":186,"line":187},[184,810,227],{"class":226},[184,812,231],{"class":230},[184,814,234],{"class":226},[184,816,237],{"class":230},[184,818,819],{"class":186,"line":240},[184,820,244],{"emptyLinePlaceholder":243},[184,822,823,825],{"class":186,"line":247},[184,824,208],{"class":257},[184,826,513],{"class":253},[184,828,829,831,833,835,837,839],{"class":186,"line":533},[184,830,518],{"class":264},[184,832,254],{"class":253},[184,834,270],{"class":253},[184,836,525],{"class":194},[184,838,270],{"class":253},[184,840,530],{"class":253},[184,842,843,845,847,849,851,853],{"class":186,"line":549},[184,844,536],{"class":264},[184,846,254],{"class":253},[184,848,270],{"class":253},[184,850,288],{"class":194},[184,852,270],{"class":253},[184,854,530],{"class":253},[184,856,857,859,861,863,865,868],{"class":186,"line":570},[184,858,552],{"class":264},[184,860,555],{"class":253},[184,862,559],{"class":558},[184,864,278],{"class":253},[184,866,867],{"class":558}," 40",[184,869,567],{"class":253},[184,871,872,874,876],{"class":186,"line":588},[184,873,491],{"class":253},[184,875,632],{"class":257},[184,877,513],{"class":253},[184,879,880,883,885,887,890,892],{"class":186,"line":604},[184,881,882],{"class":264},"    colormap",[184,884,254],{"class":253},[184,886,270],{"class":253},[184,888,889],{"class":194},"turbo",[184,891,270],{"class":253},[184,893,530],{"class":253},[184,895,897,900,902,905],{"class":186,"line":896},9,[184,898,899],{"class":264},"    transparency",[184,901,254],{"class":253},[184,903,904],{"class":558},"0.6",[184,906,530],{"class":253},[184,908,910,913,915,918,920,923],{"class":186,"line":909},10,[184,911,912],{"class":264},"    value_range",[184,914,555],{"class":253},[184,916,917],{"class":558},"270",[184,919,278],{"class":253},[184,921,922],{"class":558}," 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